CDS

Accession Number TCMCG051C09621
gbkey CDS
Protein Id XP_024453606.1
Location join(819080..819098,819262..819328,820080..820171,821730..821892,823716..823860,824662..824785,826544..826644,826732..826863,828123..828203,828752..828945,829541..829613,830726..830785,830904..830942,831050..831138,831354..831418,831757..831803,833274..833333,834766..834837,835635..835664,835744..835838,836003..836108,836241..836303,836464..836535,836745..836819)
Gene LOC18111188
GeneID 18111188
Organism Populus trichocarpa

Protein

Length 687aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024597838.1
Definition U3 small nucleolar RNA-associated protein 25 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category K
Description U3 small nucleolar RNA-associated protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14774        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000462        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030515        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034511        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCAGCGCCATGTCTCACAGGATTGAAGAGGCACAAAAGAACAAACAAATCTTGGGCTGATGGGAAACAGAAACAGAAGAAAAGACCAAGAAAAGAAGGTAAAATTGACTTGGAGGAAGATGTCGCTGGCGACTCCCAATCTCTCAGCATGTTTGAGGAAGATTCTGTTGAAGAAGGAAATGATAATGAAAGTGACCTGCAAGAGCATAGAACTGTTGGCATTGTGGATGCGGATGGAGATTCTGATTCAGAAGATATTCAGGAGGCCTCCAACACCGATCAAGAACAAGAATTGGATGTCAAGTCCCAAACTGTTGCAAAGGCACCAGCTTCCAGAAGCTCTTTCCATTCTCACTTAGAGTATAAGTTACCAGAAACTGAGGTAGAGGATCTGTTGAAGAAAAAGTGGAAATATCAATGGGATGTGCCTGCTTTTGGCATGCCAAATTGCAAGTGGGTAGGAACAGGAGAGTGTTTTCTGGAGGTAGCTAACGTAAACTCTGATTGTGGTCTCAAGCAAAGGTTATATAAACACTGGTTGGATGTGTGCAGGACATCTGGCAACAATGATTTTCATTCATCTCCACAGAGATTCTTCTTCTCTCTTTGCAATAGCTACAGAGATATTTTGCACTGTAACAAGAAGCCTTTTTACCGCAAGGGCCTAAAAGAAGACTTGGCCATCATGGATGCATACATTATGCACTGTCTAAATCACATTTTCAGAACGAGAGATCTTGTGACCAAGAATGATTCAAAAGTGGGCAAGCATTGGGAGAATGCTAAGGATGAATTGCTTAGTGGTGATGAATTCCTTGATCATGGGTTTACTCGTCCAAAGGTTTTGATCCTACTGCCCTTTAGAAGCATTGCAAATCGTGCTGTTAATAGGCTAATACAACTGACCCCCGGAGCTTACAAGGTTAATGTGGAGCACATGAGTCGTTTCTCTAACGAGTTTGGAAATCACGATGATGAAGACAATGTAAACACCAATGAGTTAACTGGAAGTGTTAAAAACTCAAACTCCCAGAAGTCCTCAAAACCACCTGACCATCAAGCACTTTTTGATGGAAATGTAGATGATAAATTTATGATAGGCATTAAATTTACAAGGAAGAGCATTAAGTTATATAGTGATTTCTATTCCTCAGACTTGATAGTCGCTTCTCCTTTGGCATTGCTGAAGAAAATTGAGGAAGCTAAACGTGACAAGGAAAAAGATGTGGATTATCTTTCTTCTATAGAGGTTCTTATCATTGATCATGCGGATGTTATAGCAATGCAGAATTGGGCCTTCCTTACATCAGTTCTTGAACAATTGAATTGCATTCCTTCTAAGCAGCATGGGACTGATATAATGCGCATTAGAAAGTGGTATTTGGATGGACATGCCAGATTTTATCGGCAAACAATTGTTTTAGGTTGTTATGCAAACCCAGACATTAATGCTTCCTTCAATCGTCAATGTGTAAACTACCAAGGAAAGGTAAAGTTGATATGTCAGTATAAAGGTGTTCTTCCAAAAGTCTCAGACCAAGTACGACAGATTTATCAGCGATTTGATGCAGACTCTGTGGCAGAAGCTGACAATGCTCGACTTGACTACTTTGTTCAGAAGGTGTTCCCAAAAATTAAAGATTCAGATGAGGGTGGGGTTATGCTATTTATTAGTTCTTACTATGAATATGTTCGACTTCGAAACTTTTTGAAGTCGCAGAATGCATCCCTGTGTTTGCTTGGAGACTACGCCGAACCAAGGGATGTCACTCGTATGCGGAATTGGTTTCGTAATGGAGAAAAGAAAATCATGCTTTACACAGAAAGATTTCATTTTTACCGTAGATACAAGATTGGTGGTGTTCGAAATTTGATCGTCTATTCTCTCCCTGAGAGGAAGGAGTTCTTCCCGGAGGTTGTCAACATGCTTGAAGGGGCTGATGACATGACATGCACTGTGCTCTTTTCTCAATTCGATCAACTCCAGCTTGAGAGAATTGTTGGAACTGCTTCTGCAAGAAGAATGATCACCTCAGAAAAGGGTGTCTTTGTGTTCTGTTGA
Protein:  
MPAPCLTGLKRHKRTNKSWADGKQKQKKRPRKEGKIDLEEDVAGDSQSLSMFEEDSVEEGNDNESDLQEHRTVGIVDADGDSDSEDIQEASNTDQEQELDVKSQTVAKAPASRSSFHSHLEYKLPETEVEDLLKKKWKYQWDVPAFGMPNCKWVGTGECFLEVANVNSDCGLKQRLYKHWLDVCRTSGNNDFHSSPQRFFFSLCNSYRDILHCNKKPFYRKGLKEDLAIMDAYIMHCLNHIFRTRDLVTKNDSKVGKHWENAKDELLSGDEFLDHGFTRPKVLILLPFRSIANRAVNRLIQLTPGAYKVNVEHMSRFSNEFGNHDDEDNVNTNELTGSVKNSNSQKSSKPPDHQALFDGNVDDKFMIGIKFTRKSIKLYSDFYSSDLIVASPLALLKKIEEAKRDKEKDVDYLSSIEVLIIDHADVIAMQNWAFLTSVLEQLNCIPSKQHGTDIMRIRKWYLDGHARFYRQTIVLGCYANPDINASFNRQCVNYQGKVKLICQYKGVLPKVSDQVRQIYQRFDADSVAEADNARLDYFVQKVFPKIKDSDEGGVMLFISSYYEYVRLRNFLKSQNASLCLLGDYAEPRDVTRMRNWFRNGEKKIMLYTERFHFYRRYKIGGVRNLIVYSLPERKEFFPEVVNMLEGADDMTCTVLFSQFDQLQLERIVGTASARRMITSEKGVFVFC